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  5. Glyma.04G168300

Glyma.04G168300


Description : cycling DOF factor 3


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G168300
Cluster HCCA clusters: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
29617 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
89924 No alias cycling DOF factor 1 0.03 Orthogroups_2024-Update
A4A49_00536 No alias dof zinc finger protein dof5.7 0.03 Orthogroups_2024-Update
A4A49_12086 No alias cyclic dof factor 2 0.03 Orthogroups_2024-Update
A4A49_13356 No alias cyclic dof factor 3 0.03 Orthogroups_2024-Update
A4A49_41416 No alias dof zinc finger protein dof1.4 0.03 Orthogroups_2024-Update
At1g69570 No alias Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3] 0.03 Orthogroups_2024-Update
At5g62430 No alias Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3] 0.06 Orthogroups_2024-Update
Bradi1g03710 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Bradi1g17410 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
Bradi2g09720 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Bradi3g25670 No alias cycling DOF factor 1 0.04 Orthogroups_2024-Update
Bradi5g26240 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Brara.C01888.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F01753.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.F02115.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Brara.G02891.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G045678 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
GRMZM2G162749 No alias cycling DOF factor 1 0.03 Orthogroups_2024-Update
GRMZM2G589696 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.01G021100 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.03G258800 No alias Dof-type zinc finger DNA-binding family protein 0.01 Orthogroups_2024-Update
Glyma.05G018100 No alias OBF binding protein 4 0.05 Orthogroups_2024-Update
Glyma.13G241900 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.20G035200 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
HORVU2Hr1G017290.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU2Hr1G095390.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G113190.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
LOC_Os03g07360 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os07g48570 No alias expressed protein 0.04 Orthogroups_2024-Update
LOC_Os08g38220 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00020524-RA No alias (at5g62940 : 135.0) HCA2 induces the formation of... 0.03 Orthogroups_2024-Update
Potri.004G121800 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Pp1s37_7V6 No alias zinc finger 0.02 Orthogroups_2024-Update
Sobic.001G420300.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sobic.002G421900.1 No alias transcription factor *(DOF) 0.08 Orthogroups_2024-Update
Sobic.006G267900.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sobic.009G014400.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Solyc02g067230 No alias Dof zinc finger protein3 0.05 Orthogroups_2024-Update
Solyc03g112930 No alias Dof zinc finger protein (AHRD V3.3 *** A0A0B6VJP1_TOBAC) 0.03 Orthogroups_2024-Update
Solyc03g115940 No alias Dof zinc finger protein (AHRD V3.3 *** C4B6D7_IPOBA) 0.05 Orthogroups_2024-Update
Solyc05g007880 No alias Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA) 0.04 Orthogroups_2024-Update
Solyc06g069760 No alias Dof zinc finger protein 22 0.03 Orthogroups_2024-Update
Solyc11g010940 No alias Dof zinc finger protein (AHRD V3.3 *** W9T134_9ROSA) 0.03 Orthogroups_2024-Update
Sopen02g016410 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen03g034940 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update
Sopen03g040210 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen05g032990 No alias Dof domain, zinc finger 0.02 Orthogroups_2024-Update
Sopen06g027050 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen11g030150 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055072 iron ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 126 182
No external refs found!