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  5. Glyma.04G216400

Glyma.04G216400


Description : Putative endonuclease or glycosyl hydrolase


Gene families : OG_42_0005415 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005415_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G216400
Cluster HCCA clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
A4A49_12187 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Glyma.17G127700 No alias Putative endonuclease or glycosyl hydrolase 0.05 Orthogroups_2024-Update
LOC_Os12g06560 No alias expressed protein 0.02 Orthogroups_2024-Update
Sobic.008G047500.1 No alias endoribonuclease *(MNU) 0.04 Orthogroups_2024-Update
Solyc11g005440 No alias Endonuclease or glycosyl hydrolase, putative isoform 1... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predicted GO
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025605 OST-HTH/LOTUS_dom 247 310
IPR025605 OST-HTH/LOTUS_dom 736 791
IPR025605 OST-HTH/LOTUS_dom 1166 1225
IPR025605 OST-HTH/LOTUS_dom 871 934
IPR021139 NYN_limkain-b1 44 174
No external refs found!