Glyma.04G223200

Description : WRKY DNA-binding protein 55

Gene families : OG_42_0000005 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.04G223200
Cluster	HCCA clusters: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g34567	No alias	WRKY DNA-binding protein 35	0.03	Orthogroups_2024-Update
Brara.C01871.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Brara.G02484.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.04G218400	No alias	WRKY DNA-binding protein 13	0.05	Orthogroups_2024-Update
Glyma.08G011300	No alias	WRKY DNA-binding protein 75	0.03	Orthogroups_2024-Update
Glyma.08G078700	No alias	WRKY DNA-binding protein 14	0.04	Orthogroups_2024-Update
Glyma.13G267500	No alias	WRKY DNA-binding protein 70	0.03	Orthogroups_2024-Update
HORVU3Hr1G058670.1	No alias	WRKY-type transcription factor	0.03	Orthogroups_2024-Update
MA_17107g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_52928g0010	No alias	(at1g62300 : 129.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update
PSME_00049501-RA	No alias	(at1g62300 : 149.0) Encodes a transcription factor...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004474	malate synthase activity	IEP	Predicted GO
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	Predicted GO
BP	GO:0006081	cellular aldehyde metabolic process	IEP	Predicted GO
BP	GO:0006097	glyoxylate cycle	IEP	Predicted GO
BP	GO:0008033	tRNA processing	IEP	Predicted GO
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	Predicted GO
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Predicted GO
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Predicted GO
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	Predicted GO
BP	GO:0046487	glyoxylate metabolic process	IEP	Predicted GO
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	174	233

External Links

No external refs found!

Glyma.04G223200

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation