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  5. Glyma.04G237400

Glyma.04G237400


Description : cyclic nucleotide gated channel 1


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G237400
Cluster HCCA clusters: Cluster_490

Target Alias Description ECC score Gene Family Method Actions
A4A49_19266 No alias putative cyclic nucleotide-gated ion channel 8 0.03 Orthogroups_2024-Update
A4A49_26569 No alias putative cyclic nucleotide-gated ion channel 16 0.02 Orthogroups_2024-Update
At2g28260 No alias Putative cyclic nucleotide-gated ion channel 15... 0.03 Orthogroups_2024-Update
At2g46440 No alias Cyclic nucleotide-gated ion channel 11... 0.02 Orthogroups_2024-Update
Bradi3g09550 No alias cyclic nucleotide gated channel 1 0.02 Orthogroups_2024-Update
Brara.B01180.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Brara.B01426.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
GRMZM2G135651 No alias cyclic nucleotide-gated channel 17 0.02 Orthogroups_2024-Update
HORVU7Hr1G047340.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
LOC_Os02g41710 No alias cyclic nucleotide-gated ion channel, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g38580 No alias cyclic nucleotide-gated ion channel, putative, expressed 0.02 Orthogroups_2024-Update
Sopen06g005020 No alias Integrase core domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004312 fatty acid synthase activity IEP Predicted GO
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 94 413
No external refs found!