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  5. Glyma.04G246600

Glyma.04G246600


Description : Cyclin A1;1


Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G246600
Cluster HCCA clusters: Cluster_444

Target Alias Description ECC score Gene Family Method Actions
230742 No alias CYCLIN B2;4 0.04 Orthogroups_2024-Update
A4A49_35953 No alias g2mitotic-specific cyclin s13-6 0.04 Orthogroups_2024-Update
A4A49_40931 No alias g2mitotic-specific cyclin s13-6 0.05 Orthogroups_2024-Update
At1g44110 No alias CYCA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0H5] 0.07 Orthogroups_2024-Update
At2g17620 No alias Cyclin-B2-1 [Source:UniProtKB/Swiss-Prot;Acc:Q39068] 0.02 Orthogroups_2024-Update
At3g11520 No alias Cyclin-B1-3 [Source:UniProtKB/Swiss-Prot;Acc:Q39069] 0.05 Orthogroups_2024-Update
At4g35620 No alias Cyclin-B2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39070] 0.05 Orthogroups_2024-Update
At4g37490 No alias Cyclin-B1-1 [Source:UniProtKB/Swiss-Prot;Acc:P30183] 0.04 Orthogroups_2024-Update
At5g43080 No alias Putative cyclin-A3-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FMH5] 0.03 Orthogroups_2024-Update
Brara.B00199.1 No alias regulatory protein *(CYCB) of cell cycle 0.08 Orthogroups_2024-Update
Brara.C00237.1 No alias regulatory protein *(CYCB) of cell cycle 0.06 Orthogroups_2024-Update
Brara.E01867.1 No alias regulatory protein *(TAM) involved in metaphase to... 0.06 Orthogroups_2024-Update
Brara.G00692.1 No alias regulatory protein *(CYCB) of cell cycle 0.05 Orthogroups_2024-Update
Glyma.04G043600 No alias Cyclin A3;1 0.05 Orthogroups_2024-Update
Glyma.14G154200 No alias Cyclin A1;1 0.03 Orthogroups_2024-Update
HORVU5Hr1G018820.2 No alias regulatory protein *(CYCA) of cell cycle 0.02 Orthogroups_2024-Update
Kfl00560_0010 kfl00560_0010_v1.1 (at1g76310 : 298.0) core cell cycle genes; CYCLIN B2;4... 0.02 Orthogroups_2024-Update
MA_28323g0010 No alias (at5g11300 : 355.0) mitotic-like cyclin, core cell cycle... 0.08 Orthogroups_2024-Update
MA_6619g0010 No alias (at1g44110 : 409.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.06 Orthogroups_2024-Update
MA_88982g0010 No alias (at5g11300 : 380.0) mitotic-like cyclin, core cell cycle... 0.04 Orthogroups_2024-Update
Mp5g10030.1 No alias cyclin (CYCB) 0.04 Orthogroups_2024-Update
PSME_00001614-RA No alias (p34800|ccn1_antma : 345.0) G2/mitotic-specific cyclin-1... 0.03 Orthogroups_2024-Update
Potri.001G272000 No alias Cyclin B1;4 0.03 Orthogroups_2024-Update
Potri.002G010000 No alias CYCLIN B2;4 0.07 Orthogroups_2024-Update
Potri.005G181400 No alias Cyclin A1;1 0.04 Orthogroups_2024-Update
Potri.006G035200 No alias Cyclin family protein 0.05 Orthogroups_2024-Update
Potri.016G033000 No alias Cyclin family protein 0.03 Orthogroups_2024-Update
Pp1s84_31V6 No alias n-terminal domain containing expressed 0.03 Orthogroups_2024-Update
Solyc01g009040 No alias cyclinB1_4 0.09 Orthogroups_2024-Update
Solyc02g082820 No alias cyclin B2 0.08 Orthogroups_2024-Update
Solyc03g032190 No alias cyclinB2_7 0.09 Orthogroups_2024-Update
Solyc03g120440 No alias cyclin A2_1 0.04 Orthogroups_2024-Update
Solyc04g078310 No alias cyclin A3_1 0.03 Orthogroups_2024-Update
Solyc04g082430 No alias cyclinB2_4 0.08 Orthogroups_2024-Update
Solyc06g065680 No alias cyclin A2 0.05 Orthogroups_2024-Update
Solyc07g066660 No alias cyclinB3_1 0.07 Orthogroups_2024-Update
Solyc10g078330 No alias B-type cyclin 0.1 Orthogroups_2024-Update
Solyc10g080950 No alias cyclinB1_2 0.1 Orthogroups_2024-Update
Solyc11g005090 No alias cyclin A1 0.04 Orthogroups_2024-Update
Solyc12g088470 No alias cyclin A3_4 0.03 Orthogroups_2024-Update
Sopen01g004530 No alias Cyclin, N-terminal domain 0.08 Orthogroups_2024-Update
Sopen02g027620 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update
Sopen03g006030 No alias Cyclin, N-terminal domain 0.06 Orthogroups_2024-Update
Sopen04g036020 No alias Cyclin, N-terminal domain 0.11 Orthogroups_2024-Update
Sopen06g024200 No alias Cyclin, N-terminal domain 0.02 Orthogroups_2024-Update
Sopen10g028990 No alias Cyclin, N-terminal domain 0.05 Orthogroups_2024-Update
Sopen10g031460 No alias Cyclin, N-terminal domain 0.07 Orthogroups_2024-Update
Sopen12g030490 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update
evm.model.contig_554.3 No alias (q40671|ccnb2_orysa : 240.0) G2/mitotic-specific... 0.02 Orthogroups_2024-Update
evm.model.tig00000076.67 No alias (at1g44110 : 156.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.01 Orthogroups_2024-Update
evm.model.tig00000769.38 No alias (at1g76310 : 252.0) core cell cycle genes; CYCLIN B2;4... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0000796 condensin complex IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006671 Cyclin_N 222 348
IPR004367 Cyclin_C-dom 351 470
No external refs found!