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  5. Glyma.05G003900

Glyma.05G003900


Description : Raffinose synthase family protein


Gene families : OG_42_0000676 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G003900
Cluster HCCA clusters: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Bradi2g04310 No alias Raffinose synthase family protein 0.04 Orthogroups_2024-Update
Bradi5g13570 No alias seed imbibition 2 0.02 Orthogroups_2024-Update
GRMZM2G150906 No alias Raffinose synthase family protein 0.04 Orthogroups_2024-Update
GRMZM2G311756 No alias seed imbibition 2 0.04 Orthogroups_2024-Update
Glyma.09G016600 No alias seed imbibition 2 0.04 Orthogroups_2024-Update
HORVU7Hr1G027930.7 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_139754g0010 No alias (at3g57520 : 805.0) seed imbibition 2 (SIP2); CONTAINS... 0.03 Orthogroups_2024-Update
PSME_00005363-RA No alias (at1g55740 : 295.0) seed imbibition 1 (SIP1); CONTAINS... 0.02 Orthogroups_2024-Update
PSME_00005466-RA No alias (at5g20250 : 946.0) encodes a member of glycosyl... 0.06 Orthogroups_2024-Update
PSME_00025208-RA No alias (at1g55740 : 1032.0) seed imbibition 1 (SIP1); CONTAINS... 0.04 Orthogroups_2024-Update
PSME_00026740-RA No alias (at5g20250 : 246.0) encodes a member of glycosyl... 0.05 Orthogroups_2024-Update
Potri.006G052800 No alias seed imbibition 2 0.03 Orthogroups_2024-Update
Potri.007G123400 No alias Raffinose synthase family protein 0.03 Orthogroups_2024-Update
Seita.4G057000.1 No alias galactinol-sucrose galactosyltransferase 0.03 Orthogroups_2024-Update
Seita.9G043300.1 No alias alkaline alpha-galactosidase *(SIP2) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0019637 organophosphate metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0090407 organophosphate biosynthetic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008811 Glycosyl_hydrolases_36 24 742
No external refs found!