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  5. Glyma.05G009300

Glyma.05G009300


Description : BED zinc finger ;hAT family dimerisation domain


Gene families : OG_42_0000225 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000225_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G009300
Cluster HCCA clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g51300 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Sopen01g026300 No alias hAT family C-terminal dimerisation region 0.03 Orthogroups_2024-Update
Sopen12g008930 No alias Domain of unknown function (DUF4413) 0.03 Orthogroups_2024-Update
Sopen12g015190 No alias hAT family C-terminal dimerisation region 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
BP GO:0001510 RNA methylation IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0016556 mRNA modification IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0080009 mRNA methylation IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!