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  5. Glyma.05G022900

Glyma.05G022900


Description : photosystem I subunit F


Gene families : OG_42_0005007 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005007_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G022900
Cluster HCCA clusters: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
75361 No alias photosystem I subunit F 0.02 Orthogroups_2024-Update
A4A49_36554 No alias photosystem i reaction center subunit iii, chloroplastic 0.08 Orthogroups_2024-Update
At1g31330 No alias Photosystem I reaction center subunit III, chloroplastic... 0.08 Orthogroups_2024-Update
Bradi1g06890 No alias photosystem I subunit F 0.04 Orthogroups_2024-Update
Brara.G00547.1 No alias component *(PsaF) of PS-I complex 0.11 Orthogroups_2024-Update
Brara.H00722.1 No alias component *(PsaF) of PS-I complex 0.13 Orthogroups_2024-Update
Brara.I02744.1 No alias component *(PsaF) of PS-I complex 0.14 Orthogroups_2024-Update
Cre09.g412100 No alias photosystem I subunit F 0.1 Orthogroups_2024-Update
GRMZM2G085646 No alias photosystem I subunit F 0.03 Orthogroups_2024-Update
HORVU5Hr1G100140.2 No alias component *(PsaF) of PS-I complex 0.07 Orthogroups_2024-Update
Kfl00213_0040 kfl00213_0040_v1.1 (p13192|psaf_horvu : 208.0) Photosystem I reaction... 0.05 Orthogroups_2024-Update
LOC_Os03g56670 No alias photosystem I reaction center subunit III, chloroplast... 0.03 Orthogroups_2024-Update
MA_10090427g0010 No alias (at1g31330 : 242.0) Encodes subunit F of photosystem I.;... 0.06 Orthogroups_2024-Update
Mp2g02960.1 No alias component PsaF of PS-I complex 0.12 Orthogroups_2024-Update
PSME_00056206-RA No alias (at1g31330 : 247.0) Encodes subunit F of photosystem I.;... 0.04 Orthogroups_2024-Update
Pp1s121_54V6 No alias photosystem i subunit iii 0.15 Orthogroups_2024-Update
Pp1s19_276V6 No alias photosystem i subunit iii 0.13 Orthogroups_2024-Update
Pp1s345_25V6 No alias photosystem i subunit iii 0.15 Orthogroups_2024-Update
Pp1s80_23V6 No alias photosystem i subunit iii 0.08 Orthogroups_2024-Update
Seita.9G069300.1 No alias component *(PsaF) of PS-I complex 0.14 Orthogroups_2024-Update
Sobic.001G070500.1 No alias component *(PsaF) of PS-I complex 0.14 Orthogroups_2024-Update
Solyc02g069450 No alias Photosystem I reaction center subunit III (AHRD V3.3 ***... 0.09 Orthogroups_2024-Update
Solyc02g069460 No alias Photosystem I reaction center subunit III (AHRD V3.3 ***... 0.1 Orthogroups_2024-Update
Sopen02g018590 No alias Photosystem I reaction centre subunit III 0.08 Orthogroups_2024-Update
Sopen02g018600 No alias Photosystem I reaction centre subunit III 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009538 photosystem I reaction center IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004061 arylformamidase activity IEP Predicted GO
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006569 tryptophan catabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009074 aromatic amino acid family catabolic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0009310 amine catabolic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015995 chlorophyll biosynthetic process IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042180 cellular ketone metabolic process IEP Predicted GO
BP GO:0042402 cellular biogenic amine catabolic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0042436 indole-containing compound catabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0042537 benzene-containing compound metabolic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
BP GO:0046218 indolalkylamine catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
BP GO:0070189 kynurenine metabolic process IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003666 PSI_PsaF 58 223
No external refs found!