Glyma.05G030000

Description : homeobox 1

Gene families : OG_42_0000105 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000105_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.05G030000
Cluster	HCCA clusters: Cluster_79

Target	Alias	Description	ECC score	Gene Family Method
A4A49_10256	No alias	homeobox-leucine zipper protein hat5	0.05	Orthogroups_2024-Update
At5g65310	No alias	Homeobox-leucine zipper protein ATHB-5...	0.03	Orthogroups_2024-Update
Bradi1g71930	No alias	homeobox 3	0.02	Orthogroups_2024-Update
Bradi1g73190	No alias	Homeobox-leucine zipper protein family	0.03	Orthogroups_2024-Update
Bradi4g29380	No alias	homeobox 1	0.02	Orthogroups_2024-Update
Brara.B00111.1	No alias	regulatory protein *(LMI1) of floral meristem identity...	0.02	Orthogroups_2024-Update
Brara.B01882.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.C00651.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Brara.G01237.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I04578.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Glyma.13G064000	No alias	homeobox 3	0.02	Orthogroups_2024-Update
Kfl00088_0250	kfl00088_0250_v1.1	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update
Kfl00862_0040	kfl00862_0040_v1.1	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update
LOC_Os03g10210	No alias	homeobox domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g45810	No alias	homeobox associated leucine zipper, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g21180	No alias	homeobox associated leucine zipper, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g29460	No alias	homeobox associated leucine zipper, putative, expressed	0.03	Orthogroups_2024-Update
MA_10428916g0010	No alias	(at3g01470 : 117.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
MA_12053g0010	No alias	(at1g69780 : 145.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
MA_128g0010	No alias	(at1g69780 : 137.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
MA_130615g0020	No alias	(at2g22430 : 152.0) Encodes a homeodomain leucine zipper...	0.05	Orthogroups_2024-Update
MA_169305g0010	No alias	(at2g22430 : 149.0) Encodes a homeodomain leucine zipper...	0.04	Orthogroups_2024-Update
MA_19453g0040	No alias	(at3g01470 : 183.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
MA_3951g0010	No alias	(at1g69780 : 143.0) Encodes a homeodomain leucine zipper...	0.02	Orthogroups_2024-Update
PSME_00014389-RA	No alias	(at1g69780 : 146.0) Encodes a homeodomain leucine zipper...	0.03	Orthogroups_2024-Update
Potri.001G083700	No alias	homeobox 7	0.03	Orthogroups_2024-Update
Potri.002G176300	No alias	homeobox 7	0.03	Orthogroups_2024-Update
Potri.007G097100	No alias	homeobox protein 6	0.03	Orthogroups_2024-Update
Pp1s154_145V6	No alias	af402605_1homeodomain leucine zipper protein hdz2	0.02	Orthogroups_2024-Update
Pp1s431_27V6	No alias	af402605_1homeodomain leucine zipper protein hdz2	0.02	Orthogroups_2024-Update
Seita.1G253700.1	No alias	HD-ZIP I/II-type transcription factor	0.04	Orthogroups_2024-Update
Seita.7G184600.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G524200.1	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.007G226600.3	No alias	HD-ZIP I/II-type transcription factor	0.03	Orthogroups_2024-Update
Solyc02g077590	No alias	Homeobox-leucine zipper protein family (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc03g082550	No alias	Homeobox leucine zipper (AHRD V3.3 - J7FWS7_ROSRU)	0.03	Orthogroups_2024-Update
Solyc03g113270	No alias	LEVAHOX1G L.esculentum homeobox	0.05	Orthogroups_2024-Update
Sopen02g022490	No alias	Homeobox domain	0.04	Orthogroups_2024-Update
Sopen04g001860	No alias	Homeobox associated leucine zipper	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Predicted GO
MF	GO:0003997	acyl-CoA oxidase activity	IEP	Predicted GO
MF	GO:0004806	triglyceride lipase activity	IEP	Predicted GO
MF	GO:0005515	protein binding	IEP	Predicted GO
CC	GO:0005634	nucleus	IEP	Predicted GO
CC	GO:0005672	transcription factor TFIIA complex	IEP	Predicted GO
CC	GO:0005777	peroxisome	IEP	Predicted GO
BP	GO:0006284	base-excision repair	IEP	Predicted GO
BP	GO:0006352	DNA-templated transcription, initiation	IEP	Predicted GO
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Predicted GO
BP	GO:0006635	fatty acid beta-oxidation	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
MF	GO:0008134	transcription factor binding	IEP	Predicted GO
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Predicted GO
BP	GO:0009062	fatty acid catabolic process	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
BP	GO:0016042	lipid catabolic process	IEP	Predicted GO
BP	GO:0016054	organic acid catabolic process	IEP	Predicted GO
MF	GO:0016298	lipase activity	IEP	Predicted GO
MF	GO:0016634	oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Predicted GO
MF	GO:0017025	TBP-class protein binding	IEP	Predicted GO
MF	GO:0019104	DNA N-glycosylase activity	IEP	Predicted GO
BP	GO:0019395	fatty acid oxidation	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
MF	GO:0031683	G-protein beta/gamma-subunit complex binding	IEP	Predicted GO
BP	GO:0034440	lipid oxidation	IEP	Predicted GO
CC	GO:0042579	microbody	IEP	Predicted GO
CC	GO:0043227	membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Predicted GO
BP	GO:0044242	cellular lipid catabolic process	IEP	Predicted GO
CC	GO:0044798	nuclear transcription factor complex	IEP	Predicted GO
BP	GO:0046395	carboxylic acid catabolic process	IEP	Predicted GO
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	Predicted GO
CC	GO:0090575	RNA polymerase II transcription factor complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	83	137
IPR003106	Leu_zip_homeo	138	179

External Links

No external refs found!

Glyma.05G030000

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation