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  5. Glyma.05G040600

Glyma.05G040600


Description : histone deacetylase 6


Gene families : OG_42_0000706 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000706_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G040600
Cluster HCCA clusters: Cluster_415

Target Alias Description ECC score Gene Family Method Actions
A4A49_16800 No alias histone deacetylase 19 0.03 Orthogroups_2024-Update
Mp1g29190.1 No alias class-I histone deacetylase. deacetylase component HDA19... 0.02 Orthogroups_2024-Update
Potri.004G209800 No alias histone deacetylase 1 0.04 Orthogroups_2024-Update
Pp1s180_68V6 No alias histone deacetylase 0.02 Orthogroups_2024-Update
Sopen11g026740 No alias Histone deacetylase domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004484 mRNA guanylyltransferase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006370 7-methylguanosine mRNA capping IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008192 RNA guanylyltransferase activity IEP Predicted GO
BP GO:0009452 7-methylguanosine RNA capping IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0036260 RNA capping IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0070568 guanylyltransferase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 49 340
No external refs found!