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Description : Zinc finger, C3HC4 type (RING finger) family protein
Gene families : OG_42_0000431 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000431_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Glycine release: Glyma.05G048800 | |
| Cluster | HCCA clusters: Cluster_248 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 78385 | No alias | Zinc finger, C3HC4 type (RING finger) family protein | 0.02 | Orthogroups_2024-Update | |
| Brara.I04212.1 | No alias | E3 ubiquitin ligase *(RIE1) | 0.03 | Orthogroups_2024-Update | |
| HORVU6Hr1G065230.2 | No alias | E3 ubiquitin ligase *(RIE1) | 0.02 | Orthogroups_2024-Update | |
| Mp2g06960.1 | No alias | RING-H2-class E3 ligase | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Predicted GO |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Predicted GO |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Predicted GO |
| MF | GO:0004590 | orotidine-5'-phosphate decarboxylase activity | IEP | Predicted GO |
| CC | GO:0005681 | spliceosomal complex | IEP | Predicted GO |
| BP | GO:0006206 | pyrimidine nucleobase metabolic process | IEP | Predicted GO |
| BP | GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process | IEP | Predicted GO |
| BP | GO:0006397 | mRNA processing | IEP | Predicted GO |
| BP | GO:0006650 | glycerophospholipid metabolic process | IEP | Predicted GO |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Predicted GO |
| BP | GO:0008380 | RNA splicing | IEP | Predicted GO |
| BP | GO:0009112 | nucleobase metabolic process | IEP | Predicted GO |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Predicted GO |
| MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Predicted GO |
| BP | GO:0019856 | pyrimidine nucleobase biosynthetic process | IEP | Predicted GO |
| BP | GO:0022406 | membrane docking | IEP | Predicted GO |
| BP | GO:0046112 | nucleobase biosynthetic process | IEP | Predicted GO |
| BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | Predicted GO |
| BP | GO:0048278 | vesicle docking | IEP | Predicted GO |
| BP | GO:0051640 | organelle localization | IEP | Predicted GO |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0140029 | exocytic process | IEP | Predicted GO |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Predicted GO |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 325 | 367 |
| No external refs found! |