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  5. Glyma.05G050400

Glyma.05G050400


Description : TCP family transcription factor


Gene families : OG_42_0000261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G050400
Cluster HCCA clusters: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
At1g35560 No alias Transcription factor TCP23... 0.04 Orthogroups_2024-Update
Brara.E00521.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.07G080300 No alias TCP family transcription factor 0.06 Orthogroups_2024-Update
HORVU5Hr1G117990.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
Seita.1G376200.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.03 Orthogroups_2024-Update
Sobic.003G408400.1 No alias circadian clock activation factor *(TCP20) & TCP-type... 0.03 Orthogroups_2024-Update
Sobic.004G354700.1 No alias circadian clock repression factor *(CHE) & TCP-type... 0.03 Orthogroups_2024-Update
Sobic.007G182101.1 No alias TCP-type transcription factor 0.04 Orthogroups_2024-Update
Sopen01g003750 No alias TCP family transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 74 169
No external refs found!