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  5. Glyma.05G064100

Glyma.05G064100


Description : calcium-dependent protein kinase 6


Gene families : OG_42_0000037 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G064100
Cluster HCCA clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
105020 No alias calcium-dependent protein kinase 13 0.03 Orthogroups_2024-Update
105846 No alias calmodulin-domain protein kinase 7 0.02 Orthogroups_2024-Update
A4A49_36907 No alias calcium-dependent protein kinase 24 0.02 Orthogroups_2024-Update
LOC_Os02g46090 No alias CAMK_CAMK_like.15 - CAMK includes calcium/calmodulin... 0.02 Orthogroups_2024-Update
Seita.5G369300.1 No alias CDPK protein kinase & calcium sensor and kinase *(CPK) &... 0.04 Orthogroups_2024-Update
Seita.8G021300.1 No alias CDPK protein kinase & calcium sensor and kinase *(CPK) &... 0.04 Orthogroups_2024-Update
evm.model.contig_3451.8 No alias (at4g35310 : 416.0) calmodulin-domain protein kinase... 0.02 Orthogroups_2024-Update
evm.model.tig00000053.14 No alias (at5g23580 : 246.0) unique family of enzymes containing... 0.01 Orthogroups_2024-Update
evm.model.tig00001030.11 No alias (at5g23580 : 243.0) unique family of enzymes containing... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000347 THO complex IEP Predicted GO
CC GO:0000445 THO complex part of transcription export complex IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 31 57
No external refs found!