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  5. Glyma.05G065800

Glyma.05G065800


Description : expansin-like B1


Gene families : OG_42_0002700 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002700_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G065800
Cluster HCCA clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
At4g17030 No alias Expansin-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WRS3] 0.03 Orthogroups_2024-Update
Brara.C04532.1 No alias beta-like-class expansin 0.03 Orthogroups_2024-Update
Glyma.01G204800 No alias expansin-like B1 0.03 Orthogroups_2024-Update
Glyma.11G038300 No alias expansin-like B1 0.03 Orthogroups_2024-Update
PSME_00022360-RA No alias (q850k7|exlb1_orysa : 262.0) Expansin-like B1 precursor... 0.03 Orthogroups_2024-Update
Potri.003G087000 No alias expansin-like B1 0.04 Orthogroups_2024-Update
Seita.2G321900.1 No alias beta-like-class expansin 0.01 Orthogroups_2024-Update
Solyc08g077330 No alias Expansin-like protein (AHRD V3.3 *** W9SU42_9ROSA) 0.03 Orthogroups_2024-Update
Sopen08g026410 No alias Rare lipoprotein A (RlpA)-like double-psi beta-barrel 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
MF GO:0051011 microtubule minus-end binding IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 152 234
IPR009009 RlpA-like_DPBB 63 140
No external refs found!