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  5. Glyma.05G111500

Glyma.05G111500


Description : Predicted AT-hook DNA-binding family protein


Gene families : OG_42_0000350 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G111500
Cluster HCCA clusters: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
Glyma.11G221200 No alias AT-hook protein of GA feedback 2 0.03 Orthogroups_2024-Update
LOC_Os01g72450 No alias DNA binding protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G003800 No alias Predicted AT-hook DNA-binding family protein 0.03 Orthogroups_2024-Update
Solyc07g056300 No alias AT hook motif DNA-binding family protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 102 215
No external refs found!