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  5. Glyma.05G111800

Glyma.05G111800


Description : AT hook motif DNA-binding family protein


Gene families : OG_42_0000248 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G111800
Cluster HCCA clusters: Cluster_410

Target Alias Description ECC score Gene Family Method Actions
At4g17950 No alias AT-hook motif nuclear-localized protein 13... 0.03 Orthogroups_2024-Update
Brara.F02128.1 No alias AHL clade-B transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G143100 No alias AT-hook motif nuclear-localized protein 1 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005175 PPC_dom 157 271
No external refs found!