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  5. Glyma.05G125600

Glyma.05G125600


Description : FAD-binding Berberine family protein


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G125600
Cluster HCCA clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g21690 No alias EDA28/MEE23, putative, expressed 0.03 Orthogroups_2024-Update
Seita.6G055100.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Solyc02g070060 No alias FAD-binding Berberine family protein, putative (AHRD... 0.03 Orthogroups_2024-Update
Solyc09g072660 No alias FAD-binding Berberine family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc10g054480 No alias FAD-binding Berberine family protein, putative (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 91 227
IPR012951 BBE 485 542
No external refs found!