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  5. Glyma.05G140900

Glyma.05G140900


Description : nine-cis-epoxycarotenoid dioxygenase 5


Gene families : OG_42_0000424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G140900
Cluster HCCA clusters: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
A4A49_16982 No alias 9-cis-epoxycarotenoid dioxygenase nced1, chloroplastic 0.02 Orthogroups_2024-Update
At3g14440 No alias 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic... 0.03 Orthogroups_2024-Update
Glyma.01G154900 No alias nine-cis-epoxycarotenoid dioxygenase 4 0.03 Orthogroups_2024-Update
HORVU5Hr1G092850.2 No alias EC_1.13 oxidoreductase acting on single donor with... 0.04 Orthogroups_2024-Update
HORVU6Hr1G068720.4 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.02 Orthogroups_2024-Update
Pp1s118_231V6 No alias MAA21.150; 9-cis-epoxycarotenoid dioxygenase /... 0.02 Orthogroups_2024-Update
Pp1s132_26V6 No alias carotenoid cleavage dioxygenase 0.02 Orthogroups_2024-Update
Sobic.004G268500.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.02 Orthogroups_2024-Update
Solyc01g087260 No alias carotenoid cleavage dioxygenase 1B 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 122 581
No external refs found!