- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Pentatricopeptide repeat (PPR) superfamily protein
Gene families : OG_42_0008888 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008888_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Glycine release: Glyma.05G150200 | |
| Cluster | HCCA clusters: Cluster_278 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Solyc09g092550 | No alias | 30S ribosomal S5 (AHRD V3.3 *-* A0A0B0MR18_GOSAR) | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003883 | CTP synthase activity | IEP | Predicted GO |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Predicted GO |
| MF | GO:0004576 | oligosaccharyl transferase activity | IEP | Predicted GO |
| CC | GO:0005856 | cytoskeleton | IEP | Predicted GO |
| CC | GO:0005956 | protein kinase CK2 complex | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Predicted GO |
| BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Predicted GO |
| BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
| BP | GO:0006396 | RNA processing | IEP | Predicted GO |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | Predicted GO |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | Predicted GO |
| BP | GO:0015743 | malate transport | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
| MF | GO:0016151 | nickel cation binding | IEP | Predicted GO |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
| MF | GO:0019207 | kinase regulator activity | IEP | Predicted GO |
| BP | GO:0019627 | urea metabolic process | IEP | Predicted GO |
| MF | GO:0019887 | protein kinase regulator activity | IEP | Predicted GO |
| CC | GO:0030120 | vesicle coat | IEP | Predicted GO |
| CC | GO:0030126 | COPI vesicle coat | IEP | Predicted GO |
| BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
| BP | GO:0043419 | urea catabolic process | IEP | Predicted GO |
| BP | GO:0043605 | cellular amide catabolic process | IEP | Predicted GO |
| BP | GO:0044282 | small molecule catabolic process | IEP | Predicted GO |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Predicted GO |
| MF | GO:0070569 | uridylyltransferase activity | IEP | Predicted GO |
| BP | GO:0071941 | nitrogen cycle metabolic process | IEP | Predicted GO |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |