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  5. Glyma.05G166200

Glyma.05G166200


Description : F-box and associated interaction domains-containing protein


Gene families : OG_42_0000102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G166200
Cluster HCCA clusters: Cluster_330

Target Alias Description ECC score Gene Family Method Actions
A4A49_13045 No alias f-box protein cpr30 0.03 Orthogroups_2024-Update
A4A49_29592 No alias f-boxkelch-repeat protein 0.02 Orthogroups_2024-Update
A4A49_34451 No alias f-boxkelch-repeat protein 0.02 Orthogroups_2024-Update
Glyma.06G181300 No alias F-box family protein 0.03 Orthogroups_2024-Update
Potri.001G318300 No alias F-box family protein 0.05 Orthogroups_2024-Update
Potri.010G207500 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Potri.011G037200 No alias F-box and associated interaction domains-containing protein 0.03 Orthogroups_2024-Update
Potri.T088200 No alias F-box associated ubiquitination effector family protein 0.03 Orthogroups_2024-Update
Solyc07g052580 No alias LOW QUALITY:F-box protein, putative (AHRD V3.3 *** Q6L3P8_SOLDE) 0.03 Orthogroups_2024-Update
Sopen07g027210 No alias F-box domain 0.03 Orthogroups_2024-Update
Sopen09g001690 No alias F-box domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 5 39
No external refs found!