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  5. Glyma.05G179900

Glyma.05G179900


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G179900
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
A4A49_07545 No alias pathogenesis-related genes transcriptional activator pti6 0.04 Orthogroups_2024-Update
A4A49_08495 No alias ethylene-responsive transcription factor 3 0.02 Orthogroups_2024-Update
A4A49_24642 No alias ethylene-responsive transcription factor rap2-11 0.02 Orthogroups_2024-Update
A4A49_28228 No alias ethylene-responsive transcription factor erf017 0.02 Orthogroups_2024-Update
A4A49_42088 No alias ethylene-responsive transcription factor 13 0.02 Orthogroups_2024-Update
A4A49_42290 No alias ethylene-responsive transcription factor rap2-4 0.02 Orthogroups_2024-Update
At1g15360 No alias Ethylene-responsive transcription factor WIN1... 0.04 Orthogroups_2024-Update
At1g36060 No alias Ethylene-responsive transcription factor ERF055... 0.02 Orthogroups_2024-Update
At1g50640 No alias Uncharacterized protein At1g50640 (Fragment)... 0.03 Orthogroups_2024-Update
At1g74930 No alias Ethylene-responsive transcription factor ERF018... 0.03 Orthogroups_2024-Update
At2g44940 No alias Ethylene-responsive transcription factor ERF034... 0.02 Orthogroups_2024-Update
At4g16750 No alias Ethylene-responsive transcription factor ERF039... 0.03 Orthogroups_2024-Update
At5g07580 No alias Ethylene-responsive transcription factor ERF106... 0.03 Orthogroups_2024-Update
At5g11590 No alias Dehydration-responsive element-binding protein 3... 0.03 Orthogroups_2024-Update
At5g18450 No alias Dehydration-responsive element-binding protein 2G... 0.03 Orthogroups_2024-Update
At5g25390 No alias SHN3 [Source:UniProtKB/TrEMBL;Acc:A0A178USD7] 0.03 Orthogroups_2024-Update
At5g61590 No alias Ethylene-responsive transcription factor ERF107... 0.03 Orthogroups_2024-Update
At5g65130 No alias Integrase-type DNA-binding superfamily protein... 0.02 Orthogroups_2024-Update
Bradi4g29010 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Brara.A00880.1 No alias subgroup ERF-IX transcription factor 0.04 Orthogroups_2024-Update
Brara.B02302.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Brara.B03764.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.C00977.1 No alias subgroup ERF-II transcription factor *(ERF16/17/18) 0.02 Orthogroups_2024-Update
Brara.C01524.1 No alias transcription factor *(CBF/DREB1) & subgroup ERF-III... 0.02 Orthogroups_2024-Update
Brara.C03562.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.E00465.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Brara.G01019.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.03 Orthogroups_2024-Update
Brara.G02121.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Brara.G02224.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.04 Orthogroups_2024-Update
Brara.H00147.1 No alias subgroup ERF-VIII transcription factor 0.04 Orthogroups_2024-Update
Brara.I00528.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Brara.I00546.1 No alias cutin and suberin biosynthesis transcription factor... 0.05 Orthogroups_2024-Update
Brara.I01789.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.I04678.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
Brara.I05089.1 No alias subgroup ERF-VIII transcription factor 0.05 Orthogroups_2024-Update
Brara.I05105.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Brara.J02507.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Brara.J02660.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.06 Orthogroups_2024-Update
Cre14.g620500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G421033 No alias DREB and EAR motif protein 3 0.02 Orthogroups_2024-Update
Glyma.05G228100 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.08G035000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G257300 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.09G072000 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G199300 No alias cytokinin response factor 4 0.05 Orthogroups_2024-Update
Glyma.12G162700 No alias ethylene responsive element binding factor 4 0.05 Orthogroups_2024-Update
Glyma.13G233800 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.14G057900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G205600 No alias cytokinin response factor 4 0.06 Orthogroups_2024-Update
Glyma.20G070100 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.20G115300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G172800 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os02g38090 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g46410 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10434101g0010 No alias (at1g19210 : 101.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_3405g0010 No alias (q40476|erf1_tobac : 120.0) Ethylene-responsive... 0.03 Orthogroups_2024-Update
PSME_00033961-RA No alias (at5g21960 : 122.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Potri.001G079600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.001G079800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.001G313500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.003G179900 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G223100 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G073600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.008G210900 No alias ethylene-responsive element binding protein 0.03 Orthogroups_2024-Update
Potri.014G047000 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Potri.018G085700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s195_38V6 No alias ap2 erf domain-containing transcription factor 0.04 Orthogroups_2024-Update
Pp1s480_12V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Seita.1G257300.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Seita.3G145700.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Seita.3G237600.1 No alias subgroup ERF-II transcription factor *(ERF19/20) 0.03 Orthogroups_2024-Update
Seita.8G173100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G481600.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G103100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.010G052600.1 No alias subgroup ERF-II-DEAR transcription factor 0.03 Orthogroups_2024-Update
Solyc03g026280 No alias CBF 0.03 Orthogroups_2024-Update
Solyc03g093530 No alias ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc04g078640 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.07 Orthogroups_2024-Update
Solyc06g063070 No alias Ethylene Response Factor A.3 0.03 Orthogroups_2024-Update
Solyc12g009240 No alias Ethylene-responsive transcription factor ERF017 (AHRD... 0.03 Orthogroups_2024-Update
Sopen02g022270 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen08g028640 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen09g030200 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 117 166
No external refs found!