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  5. Glyma.05G189600

Glyma.05G189600


Description : CYS, MET, PRO, and GLY protein 2


Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G189600
Cluster HCCA clusters: Cluster_457

Target Alias Description ECC score Gene Family Method Actions
104879 No alias plant U-box 25 0.02 Orthogroups_2024-Update
At3g11840 No alias E3 ubiquitin-protein ligase PUB24... 0.03 Orthogroups_2024-Update
Brara.C04418.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G169690 No alias plant U-box 23 0.03 Orthogroups_2024-Update
Glyma.08G000400 No alias plant U-box 25 0.04 Orthogroups_2024-Update
Glyma.18G042100 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Mp3g22740.1 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Orthogroups_2024-Update
Potri.006G202600 No alias plant U-box 22 0.03 Orthogroups_2024-Update
Potri.007G110600 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Potri.008G137700 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G069500 No alias plant U-box 24 0.03 Orthogroups_2024-Update
Solyc01g009320 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc01g080920 No alias LOW QUALITY:U-box domain-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc11g006030 No alias U-box domain-containing family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen01g003000 No alias U-box domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008378 galactosyltransferase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 10 77
No external refs found!