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  5. Glyma.05G207500

Glyma.05G207500


Description : beta-6 tubulin


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G207500
Cluster HCCA clusters: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
233699 No alias tubulin beta chain 2 0.02 Orthogroups_2024-Update
A4A49_07023 No alias tubulin beta-2 chain 0.03 Orthogroups_2024-Update
A4A49_15205 No alias tubulin beta-2 chain 0.03 Orthogroups_2024-Update
A4A49_21669 No alias tubulin beta-2 chain 0.03 Orthogroups_2024-Update
At1g75780 No alias Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:P12411] 0.03 Orthogroups_2024-Update
Bradi1g13090 No alias tubulin beta chain 4 0.06 Orthogroups_2024-Update
Brara.G02205.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J02165.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Glyma.04G023900 No alias tubulin beta-1 chain 0.03 Orthogroups_2024-Update
Glyma.05G246100 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
Glyma.17G258300 No alias tubulin beta-1 chain 0.03 Orthogroups_2024-Update
HORVU5Hr1G100900.2 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
LOC_Os01g18050 No alias tubulin/FtsZ domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g59150 No alias tubulin/FtsZ domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_230579g0020 No alias (q76fs3|tbb6_orysa : 573.0) Tubulin beta-6 chain (Beta-6... 0.03 Orthogroups_2024-Update
Mp1g20730.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Mp2g16780.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Potri.003G126800 No alias beta-6 tubulin 0.04 Orthogroups_2024-Update
Potri.006G035400 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
Potri.016G033200 No alias beta-6 tubulin 0.04 Orthogroups_2024-Update
Pp1s218_7V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Sobic.001G069800.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Solyc04g081490 No alias beta-tubulin 0.03 Orthogroups_2024-Update
Sopen04g022350 No alias Tubulin/FtsZ family, GTPase domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004506 squalene monooxygenase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!