Description : homolog of xeroderma pigmentosum complementation group B 1
Gene families : OG_42_0003616 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003616_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.05G209700 | |
Cluster | HCCA clusters: Cluster_116 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_29819 | No alias | dna repair helicase xpb1 | 0.03 | Orthogroups_2024-Update | |
Mp3g10960.1 | No alias | subunit SSL2/XPB of multifunctional TFIIh complex.... | 0.02 | Orthogroups_2024-Update | |
Potri.001G101300 | No alias | homolog of xeroderma pigmentosum complementation group B 1 | 0.03 | Orthogroups_2024-Update | |
Sobic.003G264100.1 | No alias | component *(SSL2/XPB) of TFIIh basal transcription... | 0.03 | Orthogroups_2024-Update | |
evm.model.tig00000949.17 | No alias | (at5g41360 : 573.0) Encodes XPB2, a DNA repair protein... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
MF | GO:0016787 | hydrolase activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005049 | nuclear export signal receptor activity | IEP | Predicted GO |
CC | GO:0005643 | nuclear pore | IEP | Predicted GO |
CC | GO:0005801 | cis-Golgi network | IEP | Predicted GO |
BP | GO:0006396 | RNA processing | IEP | Predicted GO |
BP | GO:0006405 | RNA export from nucleus | IEP | Predicted GO |
BP | GO:0006406 | mRNA export from nucleus | IEP | Predicted GO |
BP | GO:0006810 | transport | IEP | Predicted GO |
BP | GO:0006886 | intracellular protein transport | IEP | Predicted GO |
BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | Predicted GO |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
BP | GO:0007030 | Golgi organization | IEP | Predicted GO |
BP | GO:0008104 | protein localization | IEP | Predicted GO |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Predicted GO |
MF | GO:0008536 | Ran GTPase binding | IEP | Predicted GO |
BP | GO:0015031 | protein transport | IEP | Predicted GO |
MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015833 | peptide transport | IEP | Predicted GO |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predicted GO |
BP | GO:0016973 | poly(A)+ mRNA export from nucleus | IEP | Predicted GO |
MF | GO:0017016 | Ras GTPase binding | IEP | Predicted GO |
MF | GO:0019899 | enzyme binding | IEP | Predicted GO |
CC | GO:0030173 | integral component of Golgi membrane | IEP | Predicted GO |
CC | GO:0031011 | Ino80 complex | IEP | Predicted GO |
CC | GO:0031228 | intrinsic component of Golgi membrane | IEP | Predicted GO |
MF | GO:0031267 | small GTPase binding | IEP | Predicted GO |
CC | GO:0031300 | intrinsic component of organelle membrane | IEP | Predicted GO |
CC | GO:0031301 | integral component of organelle membrane | IEP | Predicted GO |
BP | GO:0033036 | macromolecule localization | IEP | Predicted GO |
CC | GO:0033202 | DNA helicase complex | IEP | Predicted GO |
MF | GO:0035091 | phosphatidylinositol binding | IEP | Predicted GO |
BP | GO:0042886 | amide transport | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044428 | nuclear part | IEP | Predicted GO |
CC | GO:0044431 | Golgi apparatus part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044454 | nuclear chromosome part | IEP | Predicted GO |
BP | GO:0045184 | establishment of protein localization | IEP | Predicted GO |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
BP | GO:0050657 | nucleic acid transport | IEP | Predicted GO |
BP | GO:0050658 | RNA transport | IEP | Predicted GO |
MF | GO:0051020 | GTPase binding | IEP | Predicted GO |
BP | GO:0051028 | mRNA transport | IEP | Predicted GO |
BP | GO:0051168 | nuclear export | IEP | Predicted GO |
BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
BP | GO:0051179 | localization | IEP | Predicted GO |
BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
BP | GO:0051236 | establishment of RNA localization | IEP | Predicted GO |
BP | GO:0051641 | cellular localization | IEP | Predicted GO |
BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Predicted GO |
BP | GO:0071702 | organic substance transport | IEP | Predicted GO |
BP | GO:0071705 | nitrogen compound transport | IEP | Predicted GO |
BP | GO:0071805 | potassium ion transmembrane transport | IEP | Predicted GO |
CC | GO:0097346 | INO80-type complex | IEP | Predicted GO |
MF | GO:0140104 | molecular carrier activity | IEP | Predicted GO |
MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Predicted GO |
CC | GO:1904949 | ATPase complex | IEP | Predicted GO |
No external refs found! |