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  5. Glyma.05G214900

Glyma.05G214900


Description : SPA1-related 2


Gene families : OG_42_0000717 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G214900
Cluster HCCA clusters: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
171333 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
98534 No alias SPA1-related 4 0.04 Orthogroups_2024-Update
A4A49_29644 No alias e3 ubiquitin-protein ligase cop1 0.05 Orthogroups_2024-Update
A4A49_35805 No alias e3 ubiquitin-protein ligase cop1 0.04 Orthogroups_2024-Update
At2g46340 No alias SPA1 [Source:UniProtKB/TrEMBL;Acc:A0A178VSM9] 0.07 Orthogroups_2024-Update
Bradi2g15900 No alias SPA (suppressor of phyA-105) protein family 0.04 Orthogroups_2024-Update
Bradi2g48657 No alias SPA1-related 4 0.06 Orthogroups_2024-Update
Bradi3g57667 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.C02328.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.05 Orthogroups_2024-Update
Brara.E00142.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.04 Orthogroups_2024-Update
Glyma.12G224600 No alias SPA1-related 3 0.04 Orthogroups_2024-Update
Glyma.13G276700 No alias SPA1-related 3 0.05 Orthogroups_2024-Update
HORVU6Hr1G079680.3 No alias component *(COP1) of COP1-SPA light signal transduction... 0.03 Orthogroups_2024-Update
LOC_Os02g53140 No alias COP1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g49590 No alias suppressor of phythchrome A, putative, expressed 0.03 Orthogroups_2024-Update
Mp3g25460.1 No alias protein kinase (PEK). regulator component SPA of... 0.02 Orthogroups_2024-Update
Mp5g12010.1 No alias protein kinase (PEK). component COP1 of COP1-SPA E3... 0.03 Orthogroups_2024-Update
Potri.001G399600 No alias SPA1-related 3 0.04 Orthogroups_2024-Update
Potri.004G002700 No alias Transducin/WD40 repeat-like superfamily protein 0.06 Orthogroups_2024-Update
Potri.014G159300 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Orthogroups_2024-Update
Pp1s11_401V6 No alias ubiquitin ligase protein 0.02 Orthogroups_2024-Update
Pp1s154_52V6 No alias ubiquitin ligase protein 0.05 Orthogroups_2024-Update
Pp1s180_148V6 No alias ubiquitin ligase protein 0.05 Orthogroups_2024-Update
Pp1s25_325V6 No alias ubiquitin ligase protein 0.06 Orthogroups_2024-Update
Pp1s264_64V6 No alias ubiquitin ligase protein 0.02 Orthogroups_2024-Update
Pp1s30_295V6 No alias ubiquitin ligase protein 0.04 Orthogroups_2024-Update
Pp1s81_234V6 No alias ubiquitin ligase protein 0.05 Orthogroups_2024-Update
Pp1s86_153V6 No alias ubiquitin ligase protein 0.02 Orthogroups_2024-Update
Seita.3G139600.1 No alias regulatory component *(SPA) of COP1-SPA light signal... 0.05 Orthogroups_2024-Update
Sobic.004G312600.1 No alias component *(COP1) of COP1-SPA light signal transduction... 0.03 Orthogroups_2024-Update
Solyc07g063120 No alias Ubiquitin ligase protein cop1, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc12g005950 No alias COP1 homolog 0.03 Orthogroups_2024-Update
Solyc12g013840 No alias SPA1-related 3 (AHRD V3.3 *** AT3G15354.3) 0.05 Orthogroups_2024-Update
Sopen07g031310 No alias WD domain, G-beta repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016851 magnesium chelatase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP Predicted GO
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 718 750
IPR001680 WD40_repeat 633 666
No external refs found!