Description : Ribosomal protein S19 family protein
Gene families : OG_42_0001901 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001901_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.05G234800 | |
Cluster | HCCA clusters: Cluster_129 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
172403 | No alias | Ribosomal protein S19 family protein | 0.06 | Orthogroups_2024-Update | |
Bradi1g05340 | No alias | Ribosomal protein S19 family protein | 0.09 | Orthogroups_2024-Update | |
Bradi1g55280 | No alias | Ribosomal protein S19 family protein | 0.05 | Orthogroups_2024-Update | |
Brara.H03058.1 | No alias | component *(uS19) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Brara.J00241.1 | No alias | component *(uS19) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Cre08.g360900 | No alias | Ribosomal protein S19 family protein | 0.05 | Orthogroups_2024-Update | |
Glyma.08G042300 | No alias | Ribosomal protein S19 family protein | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G057430.1 | No alias | component *(uS19) of small ribosomal-subunit (SSU) proteome | 0.03 | Orthogroups_2024-Update | |
Kfl00160_0050 | kfl00160_0050_v1.1 | (p31674|rs15_orysa : 187.0) 40S ribosomal protein S15 -... | 0.06 | Orthogroups_2024-Update | |
MA_14543g0010 | No alias | (p31674|rs15_orysa : 245.0) 40S ribosomal protein S15 -... | 0.03 | Orthogroups_2024-Update | |
PSME_00033145-RA | No alias | (p31674|rs15_orysa : 265.0) 40S ribosomal protein S15 -... | 0.03 | Orthogroups_2024-Update | |
Pp1s13_413V6 | No alias | 40s ribosomal protein s15 | 0.05 | Orthogroups_2024-Update | |
Pp1s47_42V6 | No alias | 40s ribosomal protein s15 | 0.09 | Orthogroups_2024-Update | |
Pp1s91_124V6 | No alias | 40s ribosomal protein s15 | 0.06 | Orthogroups_2024-Update | |
Seita.2G059900.1 | No alias | component *(uS19) of small ribosomal-subunit (SSU) proteome | 0.02 | Orthogroups_2024-Update | |
Seita.9G053600.1 | No alias | component *(uS19) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Sobic.001G054900.1 | No alias | component *(uS19) of small ribosomal-subunit (SSU) proteome | 0.06 | Orthogroups_2024-Update | |
Sobic.002G056200.1 | No alias | component *(uS19) of small ribosomal-subunit (SSU) proteome | 0.05 | Orthogroups_2024-Update | |
Solyc02g082000 | No alias | Ribosomal protein S19 family protein (AHRD V3.3 *** AT5G09500.1) | 0.05 | Orthogroups_2024-Update | |
Solyc06g053820 | No alias | Chloroplast omega-3 fatty acid desaturase (AHRD V3.3 --*... | 0.1 | Orthogroups_2024-Update | |
Sopen02g026630 | No alias | Ribosomal protein S19 | 0.07 | Orthogroups_2024-Update | |
Sopen06g018940 | No alias | Ribosomal protein S19 | 0.06 | Orthogroups_2024-Update | |
Sopen09g032290 | No alias | Ribosomal protein S19 | 0.08 | Orthogroups_2024-Update | |
evm.model.contig_651.1 | No alias | (at5g09500 : 219.0) Ribosomal protein S19 family... | 0.07 | Orthogroups_2024-Update | |
evm.model.tig00020830.61 | No alias | (p31674|rs15_orysa : 236.0) 40S ribosomal protein S15 -... | 0.07 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Predicted GO |
MF | GO:0003896 | DNA primase activity | IEP | Predicted GO |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
MF | GO:0003964 | RNA-directed DNA polymerase activity | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006260 | DNA replication | IEP | Predicted GO |
BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Predicted GO |
BP | GO:0006275 | regulation of DNA replication | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
BP | GO:0007062 | sister chromatid cohesion | IEP | Predicted GO |
BP | GO:0007064 | mitotic sister chromatid cohesion | IEP | Predicted GO |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
CC | GO:0015934 | large ribosomal subunit | IEP | Predicted GO |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
BP | GO:0022402 | cell cycle process | IEP | Predicted GO |
MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
CC | GO:0031390 | Ctf18 RFC-like complex | IEP | Predicted GO |
BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
MF | GO:0034061 | DNA polymerase activity | IEP | Predicted GO |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
BP | GO:0051052 | regulation of DNA metabolic process | IEP | Predicted GO |
MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0051276 | chromosome organization | IEP | Predicted GO |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
BP | GO:1903047 | mitotic cell cycle process | IEP | Predicted GO |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002222 | Ribosomal_S19 | 53 | 138 |
No external refs found! |