Glyma.05G234800


Description : Ribosomal protein S19 family protein


Gene families : OG_42_0001901 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001901_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G234800
Cluster HCCA clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
172403 No alias Ribosomal protein S19 family protein 0.06 Orthogroups_2024-Update
Bradi1g05340 No alias Ribosomal protein S19 family protein 0.09 Orthogroups_2024-Update
Bradi1g55280 No alias Ribosomal protein S19 family protein 0.05 Orthogroups_2024-Update
Brara.H03058.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Brara.J00241.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Cre08.g360900 No alias Ribosomal protein S19 family protein 0.05 Orthogroups_2024-Update
Glyma.08G042300 No alias Ribosomal protein S19 family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G057430.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Kfl00160_0050 kfl00160_0050_v1.1 (p31674|rs15_orysa : 187.0) 40S ribosomal protein S15 -... 0.06 Orthogroups_2024-Update
MA_14543g0010 No alias (p31674|rs15_orysa : 245.0) 40S ribosomal protein S15 -... 0.03 Orthogroups_2024-Update
PSME_00033145-RA No alias (p31674|rs15_orysa : 265.0) 40S ribosomal protein S15 -... 0.03 Orthogroups_2024-Update
Pp1s13_413V6 No alias 40s ribosomal protein s15 0.05 Orthogroups_2024-Update
Pp1s47_42V6 No alias 40s ribosomal protein s15 0.09 Orthogroups_2024-Update
Pp1s91_124V6 No alias 40s ribosomal protein s15 0.06 Orthogroups_2024-Update
Seita.2G059900.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Seita.9G053600.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Sobic.001G054900.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Sobic.002G056200.1 No alias component *(uS19) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Solyc02g082000 No alias Ribosomal protein S19 family protein (AHRD V3.3 *** AT5G09500.1) 0.05 Orthogroups_2024-Update
Solyc06g053820 No alias Chloroplast omega-3 fatty acid desaturase (AHRD V3.3 --*... 0.1 Orthogroups_2024-Update
Sopen02g026630 No alias Ribosomal protein S19 0.07 Orthogroups_2024-Update
Sopen06g018940 No alias Ribosomal protein S19 0.06 Orthogroups_2024-Update
Sopen09g032290 No alias Ribosomal protein S19 0.08 Orthogroups_2024-Update
evm.model.contig_651.1 No alias (at5g09500 : 219.0) Ribosomal protein S19 family... 0.07 Orthogroups_2024-Update
evm.model.tig00020830.61 No alias (p31674|rs15_orysa : 236.0) 40S ribosomal protein S15 -... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0003896 DNA primase activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003964 RNA-directed DNA polymerase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Predicted GO
BP GO:0006275 regulation of DNA replication IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0007062 sister chromatid cohesion IEP Predicted GO
BP GO:0007064 mitotic sister chromatid cohesion IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
CC GO:0031390 Ctf18 RFC-like complex IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002222 Ribosomal_S19 53 138
No external refs found!