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  5. Glyma.05G239900

Glyma.05G239900


Description : Nucleotide excision repair, TFIIH, subunit TTDA


Gene families : OG_42_0006498 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006498_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G239900
Cluster HCCA clusters: Cluster_293

Target Alias Description ECC score Gene Family Method Actions
Kfl00481_0010 kfl00481_0010_v1.1 (at1g12400 : 95.9) Nucleotide excision repair, TFIIH,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEA InterProScan predictions
BP GO:0006289 nucleotide-excision repair IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
CC GO:0000781 chromosome, telomeric region IEP Predicted GO
CC GO:0000784 nuclear chromosome, telomeric region IEP Predicted GO
CC GO:0017053 transcriptional repressor complex IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
InterPro domains Description Start Stop
IPR009400 TFIIH_TTDA/Tfb5 46 113
No external refs found!