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  5. Glyma.05G246100

Glyma.05G246100


Description : beta-6 tubulin


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G246100
Cluster HCCA clusters: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
A4A49_57434 No alias tubulin beta-8 chain 0.05 Orthogroups_2024-Update
At5g44340 No alias Tubulin beta-4 chain [Source:UniProtKB/Swiss-Prot;Acc:P24636] 0.03 Orthogroups_2024-Update
Bradi1g13090 No alias tubulin beta chain 4 0.07 Orthogroups_2024-Update
Bradi2g10970 No alias beta-6 tubulin 0.05 Orthogroups_2024-Update
Bradi2g21340 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
Brara.E00951.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Glyma.05G207500 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
Glyma.08G054000 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
Glyma.10G235100 No alias tubulin beta 8 0.03 Orthogroups_2024-Update
LOC_Os01g59150 No alias tubulin/FtsZ domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.002G021800 No alias tubulin beta-5 chain 0.02 Orthogroups_2024-Update
Sobic.001G069800.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!