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  5. Glyma.05G248300

Glyma.05G248300


Description : C2H2-like zinc finger protein


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G248300
Cluster HCCA clusters: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
A4A49_27071 No alias protein indeterminate-domain 9 0.03 Orthogroups_2024-Update
Brara.A02400.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Glyma.07G158000 No alias indeterminate(ID)-domain 4 0.05 Orthogroups_2024-Update
Glyma.08G092300 No alias indeterminate(ID)-domain 14 0.05 Orthogroups_2024-Update
Glyma.09G170200 No alias indeterminate(ID)-domain 16 0.06 Orthogroups_2024-Update
Glyma.10G051500 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
MA_92989g0010 No alias (at1g68130 : 365.0) indeterminate(ID)-domain 14 (IDD14);... 0.03 Orthogroups_2024-Update
Mp5g20530.1 No alias C2H2 zinc finger transcription factor 0.03 Orthogroups_2024-Update
PSME_00045485-RA No alias (at1g03840 : 315.0) MGP is a nuclear-localized putative... 0.05 Orthogroups_2024-Update
Seita.5G137700.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
Seita.7G201000.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G180900.2 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Sopen01g042900 No alias Zinc finger, C2H2 type 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006338 chromatin remodeling IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0031491 nucleosome binding IEP Predicted GO
BP GO:0043044 ATP-dependent chromatin remodeling IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!