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  5. Glyma.06G005800

Glyma.06G005800


Description : COBRA-like protein 1 precursor


Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G005800
Cluster HCCA clusters: Cluster_336

Target Alias Description ECC score Gene Family Method Actions
A4A49_19523 No alias cobra-like protein 4 0.03 Orthogroups_2024-Update
A4A49_19524 No alias protein cobra 0.02 Orthogroups_2024-Update
A4A49_22532 No alias protein cobra 0.03 Orthogroups_2024-Update
At3g29810 No alias COBRA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q7] 0.03 Orthogroups_2024-Update
Bradi5g17087 No alias COBRA-like protein 1 precursor 0.02 Orthogroups_2024-Update
Glyma.02G196100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.04 Orthogroups_2024-Update
Glyma.04G160000 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Glyma.13G053200 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
HORVU0Hr1G004650.4 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.02 Orthogroups_2024-Update
Potri.015G060200 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Sobic.001G336700.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.04 Orthogroups_2024-Update
Solyc02g089130 No alias COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO) 0.03 Orthogroups_2024-Update
Solyc03g114890 No alias COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO) 0.03 Orthogroups_2024-Update
Solyc03g114910 No alias Protein COBRA (AHRD V3.3 *** COBRA_ARATH) 0.03 Orthogroups_2024-Update
Sopen01g046240 No alias COBRA-like protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA InterProScan predictions
BP GO:0016049 cell growth IEA InterProScan predictions
CC GO:0031225 anchored component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR006918 COBRA_pln 53 216
No external refs found!