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  5. Glyma.06G012500

Glyma.06G012500


Description : 3-ketoacyl-CoA synthase 4


Gene families : OG_42_0000099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G012500
Cluster HCCA clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
At2g15090 No alias 3-ketoacyl-CoA synthase 8... 0.04 Orthogroups_2024-Update
Bradi1g36847 No alias 3-ketoacyl-CoA synthase 11 0.03 Orthogroups_2024-Update
GRMZM2G104626 No alias 3-ketoacyl-CoA synthase 1 0.03 Orthogroups_2024-Update
PSME_00039231-RA No alias (at2g26640 : 582.0) Encodes KCS11, a member of the... 0.03 Orthogroups_2024-Update
Seita.9G470700.1 No alias 3-ketoacyl-CoA synthase *(KCS) 0.02 Orthogroups_2024-Update
Sopen06g024120 No alias FAE1/Type III polyketide synthase-like protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000213 tRNA-intron endonuclease activity IEP Predicted GO
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013747 ACP_syn_III_C 336 417
IPR013601 FAE1_typ3_polyketide_synth 31 320
No external refs found!