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  5. Sopen09g019320

Sopen09g019320


Description : Reverse transcriptase (RNA-dependent DNA polymerase)


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g019320
Cluster HCCA clusters: Cluster_388

Target Alias Description ECC score Gene Family Method Actions
A4A49_22884 No alias tmv resistance protein n 0.02 Orthogroups_2024-Update
At4g16950 No alias Disease resistance protein RPP5... 0.04 Orthogroups_2024-Update
Brara.B00767.1 No alias effector receptor *(NLR) 0.02 Orthogroups_2024-Update
Potri.011G013201 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Solyc11g062150 No alias Disease resistance protein (TIR-NBS-LRR class) family... 0.02 Orthogroups_2024-Update
Sopen07g028980 No alias NB-ARC domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 427 531
IPR013103 RVT_2 314 424
IPR013103 RVT_2 691 763
IPR001584 Integrase_cat-core 14 76
No external refs found!