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  5. Glyma.06G024100

Glyma.06G024100


Description : tubulin beta-1 chain


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G024100
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
164404 No alias tubulin beta chain 2 0.02 Orthogroups_2024-Update
170592 No alias tubulin beta 8 0.02 Orthogroups_2024-Update
23468 No alias tubulin beta 8 0.03 Orthogroups_2024-Update
A4A49_07023 No alias tubulin beta-2 chain 0.04 Orthogroups_2024-Update
LOC_Os03g01530 No alias tubulin/FtsZ domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Mp1g20730.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Mp2g09390.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Mp2g16780.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Potri.016G033200 No alias beta-6 tubulin 0.04 Orthogroups_2024-Update
Solyc04g081490 No alias beta-tubulin 0.03 Orthogroups_2024-Update
Solyc10g080940 No alias Tubulin beta chain (AHRD V3.3 *** TBB_HORVU) 0.04 Orthogroups_2024-Update
Sopen04g035100 No alias Tubulin/FtsZ family, GTPase domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004411 homogentisate 1,2-dioxygenase activity IEP Predicted GO
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
BP GO:0006559 L-phenylalanine catabolic process IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0007155 cell adhesion IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009074 aromatic amino acid family catabolic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
BP GO:0019439 aromatic compound catabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
BP GO:0022610 biological adhesion IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
BP GO:1901361 organic cyclic compound catabolic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 3 213
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 384
No external refs found!