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  5. Glyma.06G027500

Glyma.06G027500


Description : SHI-related sequence 5


Gene families : OG_42_0000655 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000655_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G027500
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
409925 No alias Lateral root primordium (LRP) protein-related 0.02 Orthogroups_2024-Update
Bradi2g61120 No alias Lateral root primordium (LRP) protein-related 0.02 Orthogroups_2024-Update
Brara.A02107.1 No alias SRS-type transcription factor 0.04 Orthogroups_2024-Update
Brara.B00452.1 No alias SRS-type transcription factor 0.03 Orthogroups_2024-Update
Brara.B02233.1 No alias SRS-type transcription factor 0.02 Orthogroups_2024-Update
Brara.G03355.1 No alias SRS-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G450459 No alias Lateral root primordium (LRP) protein-related 0.03 Orthogroups_2024-Update
LOC_Os09g36160 No alias LRP1, putative, expressed 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!