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  5. Glyma.06G029400

Glyma.06G029400


Description : regulatory particle triple-A ATPase 4A


Gene families : OG_42_0002597 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002597_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G029400
Cluster HCCA clusters: Cluster_440

Target Alias Description ECC score Gene Family Method Actions
Cre17.g710150 No alias AAA-type ATPase family protein 0.03 Orthogroups_2024-Update
Glyma.14G071000 No alias regulatory particle triple-A ATPase 4A 0.04 Orthogroups_2024-Update
Seita.1G046000.1 No alias regulatory component *(RPT4) of 26S proteasome 0.02 Orthogroups_2024-Update
evm.model.contig_3402.3 No alias (at5g43010 : 595.0) 26S proteasome AAA-ATPase subunit... 0.02 Orthogroups_2024-Update
evm.model.tig00000718.6 No alias (at1g45000 : 537.0) AAA-type ATPase family protein;... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 175 308
IPR032501 Prot_ATP_ID_OB 62 117
No external refs found!