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  5. Glyma.06G043800

Glyma.06G043800


Description : WD-40 repeat family protein


Gene families : OG_42_0002828 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002828_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G043800
Cluster HCCA clusters: Cluster_386

Target Alias Description ECC score Gene Family Method Actions
Brara.G01172.1 No alias component *(HOS15) of HDA9-PWR deacetylation complex 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 465 502
IPR001680 WD40_repeat 385 419
IPR001680 WD40_repeat 558 595
IPR001680 WD40_repeat 285 319
IPR001680 WD40_repeat 508 553
IPR001680 WD40_repeat 350 378
No external refs found!