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  5. Glyma.06G055500

Glyma.06G055500


Description : photosystem II subunit X


Gene families : OG_42_0003584 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003584_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G055500
Cluster HCCA clusters: Cluster_389

Target Alias Description ECC score Gene Family Method Actions
A4A49_00335 No alias hypothetical protein 0.16 Orthogroups_2024-Update
A4A49_04481 No alias hypothetical protein 0.17 Orthogroups_2024-Update
A4A49_65027 No alias hypothetical protein 0.08 Orthogroups_2024-Update
Bradi1g18050 No alias photosystem II subunit X 0.05 Orthogroups_2024-Update
Brara.G00467.1 No alias component *(PsbX) of PS-II complex 0.18 Orthogroups_2024-Update
Brara.H00651.1 No alias component *(PsbX) of PS-II complex 0.07 Orthogroups_2024-Update
Brara.H00652.1 No alias component *(PsbX) of PS-II complex 0.08 Orthogroups_2024-Update
HORVU2Hr1G019270.2 No alias component *(PsbX) of PS-II complex 0.03 Orthogroups_2024-Update
Kfl00682_0050 kfl00682_0050_v1.1 no hits & (original description: no original description) 0.11 Orthogroups_2024-Update
LOC_Os03g22370 No alias ultraviolet-B-repressible protein, putative, expressed 0.07 Orthogroups_2024-Update
MA_59693g0010 No alias no hits & (original description: no original description) 0.08 Orthogroups_2024-Update
Mp6g21460.1 No alias component PsbX of PS-II complex 0.02 Orthogroups_2024-Update
Potri.018G065200 No alias photosystem II subunit X 0.04 Orthogroups_2024-Update
Pp1s116_110V6 No alias ultraviolet-b-repressible protein 0.27 Orthogroups_2024-Update
Pp1s249_53V6 No alias ultraviolet-b-repressible protein 0.11 Orthogroups_2024-Update
Pp1s307_12V6 No alias ultraviolet-b-repressible protein 0.13 Orthogroups_2024-Update
Pp1s31_66V6 No alias ultraviolet-b-repressible protein 0.02 Orthogroups_2024-Update
Seita.2G429000.1 No alias component *(PsbX) of PS-II complex 0.13 Orthogroups_2024-Update
Sobic.002G414400.1 No alias component *(PsbX) of PS-II complex 0.19 Orthogroups_2024-Update
Sobic.003G055300.1 No alias component *(PsbX) of PS-II complex 0.12 Orthogroups_2024-Update
Solyc05g025600 No alias LOW QUALITY:Photosystem II subunit X (AHRD V3.3 ***... 0.13 Orthogroups_2024-Update
Sopen05g020200 No alias Photosystem II reaction centre X protein (PsbX) 0.14 Orthogroups_2024-Update
Sopen12g004000 No alias Photosystem II reaction centre X protein (PsbX) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015995 chlorophyll biosynthetic process IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR009518 PSII_PsbX 87 123
No external refs found!