1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.06G057900

Glyma.06G057900


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G057900
Cluster HCCA clusters: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
94907 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Brara.C04029.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.01G234100 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G018700 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.5G044700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g081110 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc03g114660 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc04g063270 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.02 Orthogroups_2024-Update
Sopen01g039430 No alias PPR repeat family 0.02 Orthogroups_2024-Update
Sopen09g001850 No alias PPR repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0032259 methylation IEP Predicted GO
InterPro domains Description Start Stop
IPR032867 DYW_dom 847 971
IPR002885 Pentatricopeptide_repeat 572 619
IPR002885 Pentatricopeptide_repeat 676 721
IPR002885 Pentatricopeptide_repeat 344 368
IPR002885 Pentatricopeptide_repeat 475 503
IPR002885 Pentatricopeptide_repeat 166 188
IPR002885 Pentatricopeptide_repeat 64 84
IPR002885 Pentatricopeptide_repeat 372 401
IPR002885 Pentatricopeptide_repeat 193 219
IPR002885 Pentatricopeptide_repeat 549 569
IPR002885 Pentatricopeptide_repeat 647 669
IPR002885 Pentatricopeptide_repeat 446 465
IPR002885 Pentatricopeptide_repeat 748 772
No external refs found!