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  5. Glyma.06G071800

Glyma.06G071800


Description : pleiotropic drug resistance 12


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G071800
Cluster HCCA clusters: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
A4A49_09052 No alias pleiotropic drug resistance protein 1 0.04 Orthogroups_2024-Update
A4A49_13046 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
A4A49_33262 No alias abc transporter g family member 32 0.03 Orthogroups_2024-Update
Bradi2g43120 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
GRMZM2G143139 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.03G192700 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
Glyma.19G192900 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
LOC_Os01g24010 No alias pleiotropic drug resistance protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g43120 No alias Plant PDR ABC transporter associated domain containing... 0.03 Orthogroups_2024-Update
LOC_Os12g32820 No alias pleiotropic drug resistance protein 3, putative, expressed 0.03 Orthogroups_2024-Update
MA_12965g0010 No alias (q949g3|pdr1_nicpl : 544.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
MA_173274g0010 No alias (q5z9s8|pdr12_orysa : 429.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
MA_249533g0010 No alias (at2g29940 : 311.0) pleiotropic drug resistance 3... 0.03 Orthogroups_2024-Update
MA_42871g0010 No alias (at1g59870 : 335.0) ATP binding cassette transporter.... 0.03 Orthogroups_2024-Update
PSME_00001267-RA No alias (q5z9s8|pdr12_orysa : 1556.0) Pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00005403-RA No alias (q8gu88|pdr7_orysa : 1833.0) Putative pleiotropic drug... 0.02 Orthogroups_2024-Update
PSME_00009473-RA No alias (at2g26910 : 1773.0) pleiotropic drug resistance 4... 0.03 Orthogroups_2024-Update
PSME_00013643-RA No alias (q76cu2|pdr1_tobac : 1408.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
Potri.001G048800 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Potri.006G248500 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Potri.010G153700 No alias pleiotropic drug resistance 9 0.03 Orthogroups_2024-Update
Pp1s12_29V6 No alias atp-binding cassette 0.02 Orthogroups_2024-Update
Sobic.003G216000.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.003G216166.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.003G216300.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.004G254100.1 No alias subfamily ABCG transporter 0.04 Orthogroups_2024-Update
Sobic.010G196900.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Solyc02g081870 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc05g053610 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc06g065670 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc12g098210 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc12g100180 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen05g032120 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
Sopen09g034570 No alias ABC-2 type transporter 0.02 Orthogroups_2024-Update
Sopen11g003190 No alias ABC-2 type transporter 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 1176 1390
IPR013525 ABC_2_trans 502 714
IPR029481 ABC_trans_N 90 141
IPR003439 ABC_transporter-like 879 1031
IPR013581 PDR_assoc 719 782
IPR003439 ABC_transporter-like 166 348
No external refs found!