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  5. Sopen09g020120

Sopen09g020120


Description : tRNA synthetases class II (D, K and N)


Gene families : OG_42_0001608 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001608_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen09g020120
Cluster HCCA clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
Brara.C03208.1 No alias asparagine-tRNA ligase & EC_6.1 ligase forming carbon-oxygen bond 0.04 Orthogroups_2024-Update
LOC_Os01g27520 No alias tRNA synthetases class II domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_377460g0010 No alias (at5g56680 : 558.0) Encodes a putative cytosolic... 0.04 Orthogroups_2024-Update
PSME_00003604-RA No alias (at5g56680 : 587.0) Encodes a putative cytosolic... 0.05 Orthogroups_2024-Update
Potri.002G249700 No alias asparaginyl-tRNA synthetase 2 0.06 Orthogroups_2024-Update
Solyc09g057950 No alias Asparaginyl-tRNA synthetase family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004364 aa-tRNA-synt_II 337 602
IPR004364 aa-tRNA-synt_II 195 261
No external refs found!