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  5. Glyma.06G120100

Glyma.06G120100


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0009565 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009565_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G120100
Cluster HCCA clusters: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
At1g43980 No alias Pentatricopeptide repeat-containing protein At1g43980,... 0.04 Orthogroups_2024-Update
Solyc04g063340 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0009143 nucleoside triphosphate catabolic process IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034655 nucleobase-containing compound catabolic process IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:1901292 nucleoside phosphate catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 414 441
IPR002885 Pentatricopeptide_repeat 488 512
IPR002885 Pentatricopeptide_repeat 384 411
IPR002885 Pentatricopeptide_repeat 83 110
IPR002885 Pentatricopeptide_repeat 315 339
IPR002885 Pentatricopeptide_repeat 208 257
IPR002885 Pentatricopeptide_repeat 111 155
No external refs found!