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  5. Glyma.06G133600

Glyma.06G133600


Description : Ubiquitin supergroup;Ribosomal protein L40e


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G133600
Cluster HCCA clusters: Cluster_321

Target Alias Description ECC score Gene Family Method Actions
At2g36170 No alias Ubiquitin-60S ribosomal protein L40-1... 0.03 Orthogroups_2024-Update
Bradi2g12280 No alias Ribosomal protein S27a / Ubiquitin family protein 0.03 Orthogroups_2024-Update
Bradi2g34750 No alias Ribosomal protein S27a / Ubiquitin family protein 0.02 Orthogroups_2024-Update
Bradi4g38540 No alias ubiquitin extension protein 1 0.04 Orthogroups_2024-Update
Brara.C01815.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Brara.I03566.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Cre06.g273600 No alias Ribosomal protein S27a / Ubiquitin family protein 0.02 Orthogroups_2024-Update
GRMZM2G006293 No alias Ribosomal protein S27a / Ubiquitin family protein 0.03 Orthogroups_2024-Update
GRMZM2G047732 No alias Ribosomal protein S27a / Ubiquitin family protein 0.04 Orthogroups_2024-Update
Glyma.01G029200 No alias Ribosomal protein S27a / Ubiquitin family protein 0.03 Orthogroups_2024-Update
Glyma.09G023700 No alias Ribosomal protein S27a / Ubiquitin family protein 0.04 Orthogroups_2024-Update
Glyma.19G195500 No alias Ubiquitin supergroup;Ribosomal protein L40e 0.03 Orthogroups_2024-Update
Kfl00345_0130 kfl00345_0130_v1.... (at3g52590 : 254.0) Ubiquitin extension protein;... 0.06 Orthogroups_2024-Update
Mp8g11720.1 No alias Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis... 0.04 Orthogroups_2024-Update
Potri.001G025300 No alias ubiquitin 6 0.03 Orthogroups_2024-Update
Potri.007G067500 No alias related to ubiquitin 1 0.04 Orthogroups_2024-Update
Pp1s13_40V6 No alias ubiquitin extension protein 0.03 Orthogroups_2024-Update
Pp1s268_35V6 No alias ubiquitin fusion protein 0.02 Orthogroups_2024-Update
Pp1s333_9V6 No alias ubiquitin fusion protein 0.04 Orthogroups_2024-Update
Pp1s56_52V6 No alias ubiquitin extension protein 0.02 Orthogroups_2024-Update
Seita.7G270700.1 No alias component *(eS31) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sobic.001G444800.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.003G152600.1 No alias component *(eS31) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sobic.009G054800.1 No alias component *(eS31) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Solyc01g056940 No alias Ubiquitin 0.02 Orthogroups_2024-Update
Solyc01g096290 No alias ubiquitin-ribosomal fusion protein 0.02 Orthogroups_2024-Update
Solyc08g083120 No alias ubiquitin-ribosomal fusion protein 0.02 Orthogroups_2024-Update
Solyc12g099030 No alias Ubiquitin, putative (AHRD V3.3 *** B9RN74_RICCO) 0.03 Orthogroups_2024-Update
Sopen01g029970 No alias Ubiquitin family 0.03 Orthogroups_2024-Update
Sopen08g004410 No alias Ubiquitin family 0.02 Orthogroups_2024-Update
evm.model.contig_2055.11 No alias (at3g52590 : 241.0) Ubiquitin extension protein;... 0.05 Orthogroups_2024-Update
evm.model.contig_3445.1 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
evm.model.tig00022075.50 No alias (at3g52590 : 236.0) Ubiquitin extension protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 3 74
IPR001975 Ribosomal_L40e 78 127
No external refs found!