Description : RNA-binding (RRM/RBD/RNP motifs) family protein
Gene families : OG_42_0000483 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000483_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.06G135100 | |
Cluster | HCCA clusters: Cluster_316 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Glyma.15G226400 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | Orthogroups_2024-Update | |
PSME_00042532-RA | No alias | (at1g76460 : 159.0) RNA-binding (RRM/RBD/RNP motifs)... | 0.03 | Orthogroups_2024-Update | |
Solyc02g082270 | No alias | RNA binding protein, putative (AHRD V3.3 *** B9R8T5_RICCO) | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | Predicted GO |
MF | GO:0003682 | chromatin binding | IEP | Predicted GO |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
BP | GO:0006351 | transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
BP | GO:0006897 | endocytosis | IEP | Predicted GO |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Predicted GO |
BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0010629 | negative regulation of gene expression | IEP | Predicted GO |
BP | GO:0016458 | gene silencing | IEP | Predicted GO |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Predicted GO |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
BP | GO:0031047 | gene silencing by RNA | IEP | Predicted GO |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
BP | GO:0032774 | RNA biosynthetic process | IEP | Predicted GO |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0046983 | protein dimerization activity | IEP | Predicted GO |
BP | GO:0048519 | negative regulation of biological process | IEP | Predicted GO |
BP | GO:0050789 | regulation of biological process | IEP | Predicted GO |
BP | GO:0050794 | regulation of cellular process | IEP | Predicted GO |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0065007 | biological regulation | IEP | Predicted GO |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Predicted GO |
BP | GO:0098657 | import into cell | IEP | Predicted GO |
MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 18 | 73 |
No external refs found! |