Glyma.06G139500

Description : ATP binding cassette subfamily B19

Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.06G139500
Cluster	HCCA clusters: Cluster_227

Target	Alias	Description	ECC score	Gene Family Method
At1g28010	No alias	ABC transporter B family member 14...	0.03	Orthogroups_2024-Update
Bradi2g11210	No alias	P-glycoprotein 21	0.02	Orthogroups_2024-Update
Bradi2g47400	No alias	ATP binding cassette subfamily B4	0.04	Orthogroups_2024-Update
Brara.D02299.1	No alias	subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Brara.H03115.1	No alias	subfamily ABCB transporter	0.04	Orthogroups_2024-Update
Brara.J00114.1	No alias	subfamily ABCB transporter	0.06	Orthogroups_2024-Update
Cre17.g725200	No alias	P-glycoprotein 21	0.01	Orthogroups_2024-Update
GRMZM2G004748	No alias	P-glycoprotein 2	0.02	Orthogroups_2024-Update
GRMZM2G085236	No alias	ATP binding cassette subfamily B19	0.02	Orthogroups_2024-Update
GRMZM2G167658	No alias	ATP binding cassette subfamily B19	0.03	Orthogroups_2024-Update
Glyma.09G206300	No alias	P-glycoprotein 2	0.02	Orthogroups_2024-Update
Glyma.10G055000	No alias	ATP binding cassette subfamily B1	0.02	Orthogroups_2024-Update
Glyma.19G016400	No alias	ABC transporter family protein	0.07	Orthogroups_2024-Update
Glyma.19G016700	No alias	ABC transporter family protein	0.04	Orthogroups_2024-Update
Glyma.19G184300	No alias	ATP binding cassette subfamily B1	0.02	Orthogroups_2024-Update
LOC_Os03g17180	No alias	ABC transporter, ATP-binding protein, putative, expressed	0.02	Orthogroups_2024-Update
MA_62683g0010	No alias	(at2g36910 : 1072.0) Belongs to the family of...	0.03	Orthogroups_2024-Update
PSME_00011041-RA	No alias	(at4g25960 : 1546.0) P-glycoprotein 2 (PGP2); FUNCTIONS...	0.03	Orthogroups_2024-Update
PSME_00039275-RA	No alias	(at3g28345 : 1459.0) ABC transporter family protein;...	0.02	Orthogroups_2024-Update
Potri.001G139700	No alias	P-glycoprotein 2	0.03	Orthogroups_2024-Update
Potri.002G187500	No alias	ATP binding cassette subfamily B4	0.03	Orthogroups_2024-Update
Potri.010G210100	No alias	P-glycoprotein 20	0.04	Orthogroups_2024-Update
Seita.7G258700.1	No alias	auxin efflux transporter *(ABCB19) & subfamily ABCB transporter	0.03	Orthogroups_2024-Update
Seita.9G449100.1	No alias	subfamily ABCB transporter	0.02	Orthogroups_2024-Update
evm.model.tig00000025.1	No alias	(at2g47000 : 429.0) Multidrug resistance P-glycoprotein...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	Predicted GO
MF	GO:0004674	protein serine/threonine kinase activity	IEP	Predicted GO
MF	GO:0005216	ion channel activity	IEP	Predicted GO
BP	GO:0006811	ion transport	IEP	Predicted GO
BP	GO:0007275	multicellular organism development	IEP	Predicted GO
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	Predicted GO
MF	GO:0008289	lipid binding	IEP	Predicted GO
MF	GO:0008417	fucosyltransferase activity	IEP	Predicted GO
MF	GO:0022838	substrate-specific channel activity	IEP	Predicted GO
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	Predicted GO
BP	GO:0032501	multicellular organismal process	IEP	Predicted GO
BP	GO:0032502	developmental process	IEP	Predicted GO
BP	GO:0042546	cell wall biogenesis	IEP	Predicted GO
BP	GO:0044085	cellular component biogenesis	IEP	Predicted GO
BP	GO:0048856	anatomical structure development	IEP	Predicted GO
MF	GO:0051536	iron-sulfur cluster binding	IEP	Predicted GO
MF	GO:0051540	metal cluster binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	1020	1169
IPR003439	ABC_transporter-like	387	536
IPR011527	ABC1_TM_dom	47	320
IPR011527	ABC1_TM_dom	684	946

External Links

No external refs found!

Glyma.06G139500

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation