Description : Ribosomal protein L16p/L10e family protein
Gene families : OG_42_0001900 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001900_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.06G140900 | |
Cluster | HCCA clusters: Cluster_76 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
437527 | No alias | Ribosomal protein L16p/L10e family protein | 0.03 | Orthogroups_2024-Update | |
A4A49_56503 | No alias | 60s ribosomal protein l10 | 0.08 | Orthogroups_2024-Update | |
A4A49_60639 | No alias | 60s ribosomal protein l10 | 0.07 | Orthogroups_2024-Update | |
Bradi2g34440 | No alias | Ribosomal protein L16p/L10e family protein | 0.03 | Orthogroups_2024-Update | |
Brara.F00957.1 | No alias | component *(uL16) of large ribosomal-subunit (LSU) proteome | 0.08 | Orthogroups_2024-Update | |
Brara.G02465.1 | No alias | component *(uL16) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
Brara.G02907.1 | No alias | component *(uL16) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Brara.H02579.1 | No alias | component *(uL16) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
Cre09.g388200 | No alias | senescence associated gene 24 | 0.04 | Orthogroups_2024-Update | |
GRMZM2G087233 | No alias | senescence associated gene 24 | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G024710.2 | No alias | component *(uL16) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
Kfl00865_0050 | kfl00865_0050_v1.1 | (p93847|rl10_solme : 387.0) 60S ribosomal protein L10... | 0.02 | Orthogroups_2024-Update | |
PSME_00015731-RA | No alias | (p93847|rl10_solme : 394.0) 60S ribosomal protein L10... | 0.02 | Orthogroups_2024-Update | |
PSME_00042423-RA | No alias | (p93847|rl10_solme : 402.0) 60S ribosomal protein L10... | 0.06 | Orthogroups_2024-Update | |
Pp1s22_94V6 | No alias | 60s ribosomal protein l10-3 | 0.1 | Orthogroups_2024-Update | |
Pp1s2_197V6 | No alias | 60s ribosomal protein l10-3 | 0.06 | Orthogroups_2024-Update | |
Pp1s347_24V6 | No alias | 60s ribosomal protein l10-3 | 0.11 | Orthogroups_2024-Update | |
Seita.1G023800.1 | No alias | component *(uL16) of large ribosomal-subunit (LSU) proteome | 0.11 | Orthogroups_2024-Update | |
Seita.7G273300.1 | No alias | component *(uL16) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Sobic.001G177800.1 | No alias | component *(uL16) of large ribosomal-subunit (LSU) proteome | 0.09 | Orthogroups_2024-Update | |
Sobic.004G103700.1 | No alias | component *(uL16) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Solyc06g007520 | No alias | 60S ribosomal protein L10 (AHRD V3.3 *** RL10_SOLME) | 0.08 | Orthogroups_2024-Update | |
Solyc06g082650 | No alias | 60S ribosomal protein L10 (AHRD V3.3 *** RL10_SOLME) | 0.08 | Orthogroups_2024-Update | |
Solyc06g082670 | No alias | 60S ribosomal protein L10 (AHRD V3.3 *** RL10_SOLME) | 0.12 | Orthogroups_2024-Update | |
Sopen06g002430 | No alias | Ribosomal protein L16p/L10e | 0.09 | Orthogroups_2024-Update | |
Sopen06g034040 | No alias | Ribosomal protein L16p/L10e | 0.08 | Orthogroups_2024-Update | |
Sopen06g034060 | No alias | Ribosomal protein L16p/L10e | 0.07 | Orthogroups_2024-Update | |
evm.model.tig00001424.5 | No alias | (p45636|rl102_orysa : 214.0) 60S ribosomal protein L10-2... | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003690 | double-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003743 | translation initiation factor activity | IEP | Predicted GO |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
MF | GO:0004519 | endonuclease activity | IEP | Predicted GO |
MF | GO:0004665 | prephenate dehydrogenase (NADP+) activity | IEP | Predicted GO |
CC | GO:0005618 | cell wall | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Predicted GO |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0005976 | polysaccharide metabolic process | IEP | Predicted GO |
BP | GO:0006073 | cellular glucan metabolic process | IEP | Predicted GO |
BP | GO:0006570 | tyrosine metabolic process | IEP | Predicted GO |
BP | GO:0006571 | tyrosine biosynthetic process | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
MF | GO:0008977 | prephenate dehydrogenase (NAD+) activity | IEP | Predicted GO |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Predicted GO |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Predicted GO |
BP | GO:0009095 | aromatic amino acid family biosynthetic process, prephenate pathway | IEP | Predicted GO |
BP | GO:0009116 | nucleoside metabolic process | IEP | Predicted GO |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Predicted GO |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016759 | cellulose synthase activity | IEP | Predicted GO |
MF | GO:0016760 | cellulose synthase (UDP-forming) activity | IEP | Predicted GO |
MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | Predicted GO |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0030243 | cellulose metabolic process | IEP | Predicted GO |
BP | GO:0030244 | cellulose biosynthetic process | IEP | Predicted GO |
CC | GO:0030312 | external encapsulating structure | IEP | Predicted GO |
MF | GO:0042393 | histone binding | IEP | Predicted GO |
BP | GO:0044042 | glucan metabolic process | IEP | Predicted GO |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | Predicted GO |
BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | Predicted GO |
MF | GO:0046527 | glucosyltransferase activity | IEP | Predicted GO |
CC | GO:0048046 | apoplast | IEP | Predicted GO |
BP | GO:1901657 | glycosyl compound metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR016180 | Ribosomal_L10e/L16 | 12 | 166 |
No external refs found! |