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  5. Solyc02g085710

Solyc02g085710


Description : Geranylgeranyl pyrophosphate synthase 4 (AHRD V3.3 *** K7P523_TOBAC)


Gene families : OG_42_0001166 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g085710
Cluster HCCA clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
Solyc02g085720 No alias Geranylgeranyl pyrophosphate synthase 4 (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 129 364
No external refs found!