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  5. Glyma.06G174700

Glyma.06G174700


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G174700
Cluster HCCA clusters: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
81909 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
A4A49_08453 No alias putative pectate lyase 5 0.03 Orthogroups_2024-Update
Brara.B01305.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
Brara.K00935.1 No alias pectate lyase & EC_4.2 carbon-oxygen lyase 0.03 Orthogroups_2024-Update
LOC_Os06g05260 No alias pectate lyase precursor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.014G178100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s84_82V6 No alias pectate lyase 0.02 Orthogroups_2024-Update
Solyc02g067450 No alias Pectate lyase (AHRD V3.3 *** M1A9L8_SOLTU) 0.04 Orthogroups_2024-Update
Solyc03g058890 No alias Pectate lyase (AHRD V3.3 *** K4BGT7_SOLLC) 0.02 Orthogroups_2024-Update
Solyc06g071840 No alias Pectate lyase (AHRD V3.3 *-* M1CKT3_SOLTU) 0.03 Orthogroups_2024-Update
Sopen02g025600 No alias Pectate lyase 0.03 Orthogroups_2024-Update
Sopen05g033960 No alias Pectate lyase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002022 Pec_lyase 144 325
No external refs found!