1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.06G196000

Glyma.06G196000


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0004610 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004610_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G196000
Cluster HCCA clusters: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
116520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
At1g74400 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Orthogroups_2024-Update
Bradi1g01363 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g30017 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G066470.6 No alias Unknown function 0.04 Orthogroups_2024-Update
PSME_00055556-RA No alias (at3g13770 : 367.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
Potri.015G128800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.2G202400.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G198801.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc03g115790 No alias LOW QUALITY:Pentatricopeptide repeat-containing protein... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 219 245
IPR002885 Pentatricopeptide_repeat 326 350
IPR002885 Pentatricopeptide_repeat 248 273
IPR002885 Pentatricopeptide_repeat 356 383
IPR002885 Pentatricopeptide_repeat 142 190
No external refs found!