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  5. Glyma.06G207400

Glyma.06G207400


Description : Translation protein SH3-like family protein


Gene families : OG_42_0002269 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G207400
Cluster HCCA clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
170832 No alias Translation protein SH3-like family protein 0.04 Orthogroups_2024-Update
Bradi3g28220 No alias Translation protein SH3-like family protein 0.03 Orthogroups_2024-Update
Brara.F00615.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.H02804.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.H02810.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.I01623.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.I05263.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Cre06.g278135 No alias Translation protein SH3-like family protein 0.05 Orthogroups_2024-Update
GRMZM2G149257 No alias Translation protein SH3-like family protein 0.04 Orthogroups_2024-Update
Glyma.19G205000 No alias Translation protein SH3-like family protein 0.05 Orthogroups_2024-Update
HORVU1Hr1G038890.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Kfl00008_0470 kfl00008_0470_v1.1 (at1g57860 : 268.0) Translation protein SH3-like family... 0.02 Orthogroups_2024-Update
LOC_Os10g32820 No alias 60S ribosomal protein L21-2, putative, expressed 0.04 Orthogroups_2024-Update
MA_186351g0010 No alias (at1g57860 : 291.0) Translation protein SH3-like family... 0.04 Orthogroups_2024-Update
PSME_00039521-RA No alias (at1g57860 : 292.0) Translation protein SH3-like family... 0.02 Orthogroups_2024-Update
Potri.006G195400 No alias Translation protein SH3-like family protein 0.05 Orthogroups_2024-Update
Pp1s107_181V6 No alias 60s ribosomal protein l21 0.08 Orthogroups_2024-Update
Pp1s1_780V6 No alias 60s ribosomal protein l21 0.05 Orthogroups_2024-Update
Pp1s298_23V6 No alias 60s ribosomal protein l21 0.07 Orthogroups_2024-Update
Pp1s91_107V6 No alias 60s ribosomal protein l21 0.03 Orthogroups_2024-Update
Seita.9G544700.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Sobic.001G226500.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Sobic.001G508900.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Solyc10g078960 No alias 60S ribosomal protein L21-like protein (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc10g080590 No alias 60S ribosomal protein L21-like protein (AHRD V3.3 ***... 0.07 Orthogroups_2024-Update
Sopen10g029590 No alias Ribosomal protein L21e 0.06 Orthogroups_2024-Update
Sopen10g031130 No alias Ribosomal protein L21e 0.06 Orthogroups_2024-Update
evm.model.contig_4456.21 No alias (at1g57860 : 119.0) Translation protein SH3-like family... 0.06 Orthogroups_2024-Update
evm.model.tig00000640.5 No alias (at1g57860 : 125.0) Translation protein SH3-like family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR001147 Ribosomal_L21e 1 92
No external refs found!