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  5. Glyma.06G229800

Glyma.06G229800


Description : FAR1-related sequence 5


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G229800
Cluster HCCA clusters: Cluster_556

Target Alias Description ECC score Gene Family Method Actions
A4A49_19470 No alias protein far-red impaired response 1 0.02 Orthogroups_2024-Update
At4g19990 No alias FAR1-related sequence 1 [Source:UniProtKB/TrEMBL;Acc:F4JU19] 0.02 Orthogroups_2024-Update
Bradi2g04713 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Bradi2g25465 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
Bradi3g28642 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
Bradi3g38179 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Bradi5g09126 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Glyma.13G024651 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Glyma.19G055300 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
HORVU1Hr1G061370.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
HORVU2Hr1G063550.3 No alias FRS/FRF-type transcription factor 0.04 Orthogroups_2024-Update
HORVU5Hr1G056070.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os01g16660 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g45300 No alias transposon protein, putative, unclassified, expressed 0.04 Orthogroups_2024-Update
LOC_Os04g25100 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g03800 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g30310 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g39680 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g18840 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g14880 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g40310 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g27390 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g11220 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g14020 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g12380 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Potri.001G017400 No alias FAR1-related sequence 4 0.03 Orthogroups_2024-Update
Potri.002G199300 No alias FAR1-related sequence 11 0.03 Orthogroups_2024-Update
Potri.016G059101 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Pp1s222_125V6 No alias No description available 0.03 Orthogroups_2024-Update
Sobic.001G070600.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
Sopen09g030440 No alias FAR1 DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 285 379
No external refs found!